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A server can be set up to only show its list of databases to users that have process privileges. If you don't see a list of databases when you connect to a server (given that the connection was successful) then the server you are connecting to is set up as above.

You can however still open databases on the server to which you have access. Just right click on the connection in the left pane and select Open Database. This will prompt you for the name of the database to open. Enter the name of the database and click OK.

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